"a big drain on resources I think."
Not really. All the file stats are in the filesystem's cache, so it's a matter of microseconds to run the GC.
Besides that I don't think you have much of an option: 'waste' some time running the GC, or re-install windows every week.
The rest of the world is not complaining about performance loss through running the GC, so why should you? 🙂