Stab in the dark (untested):
SELECT magazineTitle,month, SUM(checkedOut) as num_issues
FROM
(SELECT t2.id, t1.magazineTitle, t2.month
FROM magazines t1, issues t2
WHERE t1.id=t2.magazinID) t4
LEFT JOIN
(SELECT t3.issueCheckedOut, 1 as checkedOut
FROM readers t3) t5
ON t4.id = t5.issueCheckedOut
GROUP BY magazineTitle, month