Sure, just have the include-file define a function that takes parameters, then call the function as needed:
header.php:
<?php
function html_header($color,$title,$etc)
{
...
}
?>
main.php:
<?php
include('header.php');
...
html_header($my_color,"Main",...);
...
?>
another.php:
<?php
include('header.php');
...
html_header($different_colors,"another title", ... );
...
>